Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX474020: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-320486' containing sample 'TB_RSA81' from individual '11452/0'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.4M spots, 693.2M bases, 377.9Mb downloads

UUID: d99ffa02-f96a-488d-be11-88a50de1ed11

Design: Illumina sequencing of Mycobacterium tuberculosis TB_RSA81 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - MRC SA

PRJNA228075 • SRP036947 • All experiments • All runs

Sample: Generic sample from Mycobacterium tuberculosis TB_RSA81

SAMN02403522 • SRS555292 • All experiments • All runs

Organism: Mycobacterium tuberculosis TB_RSA81

Library:

Name: Pond-320486

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 12 attributes...) (hide...)

analysis_type: AssemblyWithReference

gssr_id: 453868.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5819F

material_type: DNA:DNA Somatic

product_order: PDO-2551

product_part_number: P-MCV-0001

project: G54484

research_project: RP-114

root_sample_id: SM-4PMQJ

sample_id: SM-5819F

work_request: 39310

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-06 13:50:38.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.4M spots, 693.2M bases, 377.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR1173736	1,713,000	346M	188.4Mb	2014-02-20
SRR1173737	1,718,721	347.2M	189.5Mb	2014-02-20

ID:: 654510

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